usefragsph not on
There are 23 ligand heavy atoms
Ligand center of coords (x y z): 8.96869565217391 12.6936956521739 17.9879565217391
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1493
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 713
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 713
Number of spheres polar: 258, nonpolar: 417, out of current total: 713
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -0.96032 18.94404 2.70455 22.68065 8.00798 27.98241
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 340
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 285
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 211
Spheres center of coords (x y z): 8.23391786729857 10.005855971564 19.3154943127962
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.18710652439077
Final number of output spheres is: 60
Number of polar spheres: 14
Number of nonpolar spheres: 46
Number of spheres that are near neither polar nor nonpolar receptor atoms: 0
Final number of spheres that are from crystallographic ligand: 23