usefragsph not on
There are 36 ligand heavy atoms
Ligand center of coords (x y z): -3.96355555555556 -34.1597777777778 23.9763333333333
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2315
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1056
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1056
Number of spheres polar: 324, nonpolar: 609, out of current total: 1056
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -13.92591 6.03204 -44.14483 -24.18003 14.02799 33.97358
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 321
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 250
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 182
Spheres center of coords (x y z): -7.26383769230769 -35.3272501648351 25.445582032967
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.38609820925621
Final number of output spheres is: 45
Number of polar spheres: 12
Number of nonpolar spheres: 30
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 36