usefragsph not on
There are 36 ligand heavy atoms
Ligand center of coords (x y z): -3.96355555555556 -34.1597777777778 23.9763333333333
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2315
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1056
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1056
Number of spheres polar: 324, nonpolar: 609, out of current total: 1056
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -13.92591 6.03204 -44.14483 -24.18003 14.02799 33.97358
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 540
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 450
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 335
Spheres center of coords (x y z): -6.97484014925373 -35.1697708059701 25.4313252537313
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.18685876815298
Final number of output spheres is: 60
Number of polar spheres: 19
Number of nonpolar spheres: 38
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 36