usefragsph not on
There are 34 ligand heavy atoms
Ligand center of coords (x y z): -4.31014705882353 -34.4750294117647 24.044
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2186
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1094
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1094
Number of spheres polar: 427, nonpolar: 547, out of current total: 1094
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -14.30371 5.68543 -44.46525 -24.51910 14.04956 33.95408
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 539
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 454
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 424
Spheres center of coords (x y z): -6.17268969339623 -36.5649881367925 23.4947952830189
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.78953607138705
Final number of output spheres is: 60
Number of polar spheres: 28
Number of nonpolar spheres: 30
Number of spheres that are near neither polar nor nonpolar receptor atoms: 2
Final number of spheres that are from crystallographic ligand: 34