usefragsph not on
There are 21 ligand heavy atoms
Ligand center of coords (x y z): 64.4891904761905 56.8995238095238 -59.7210952380952
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1537
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 874
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 874
Number of spheres polar: 158, nonpolar: 266, out of current total: 874
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 54.63062 74.48830 46.96139 66.85989 -69.71008 -49.74102
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 529
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 467
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 425
Spheres center of coords (x y z): 67.6078264470588 59.3281496235295 -59.4834124
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.68331738753054
Final number of output spheres is: 60
Number of polar spheres: 7
Number of nonpolar spheres: 23
Number of spheres that are near neither polar nor nonpolar receptor atoms: 30
Final number of spheres that are from crystallographic ligand: 21