usefragsph not on
There are 31 ligand heavy atoms
Ligand center of coords (x y z): 8.60806451612903 11.2701935483871 17.0216774193548
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2021
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 879
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 879
Number of spheres polar: 252, nonpolar: 545, out of current total: 879
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -1.38800 18.57555 1.28203 21.17172 7.02409 26.98738
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 415
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 356
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 307
Spheres center of coords (x y z): 8.46299905537459 8.38513596091206 17.1013444299674
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.0464882791747
Final number of output spheres is: 60
Number of polar spheres: 12
Number of nonpolar spheres: 45
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 31