usefragsph not on
There are 25 ligand heavy atoms
Ligand center of coords (x y z): 9.773 12.66008 17.10284
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1860
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 913
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 913
Number of spheres polar: 277, nonpolar: 545, out of current total: 913
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -0.10546 19.58871 2.66176 22.62566 7.10530 26.82870
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 451
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 368
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 285
Spheres center of coords (x y z): 10.3831933684211 13.8163759649123 13.8628063157895
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.90697198756581
Final number of output spheres is: 60
Number of polar spheres: 15
Number of nonpolar spheres: 41
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 25