There are 18 ligand heavy atoms Ligand center of coords (x y z): -2.29266666666667 73.6644444444445 33.808 useligsph not on Starting number of spheres from sph/sph cluster 0: 654 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 576 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 555 Number of spheres polar: 267, nonpolar: 129, out of current total: 555 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -11.57599 6.91219 63.28362 85.61096 21.83138 45.65891 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 213 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 170 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -2.29266666666667 73.6644444444445 33.808 Center point: 100 xyz: -2.29255 74.83821 33.50589 After continuity checking, number of spheres is: 145 Spheres center of coords (x y z): -3.23575910344828 74.9853917931035 35.7573249655172 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): -5.08065147119767 69.1502652300043 23.3582424368007 Average weighted-distance for final elimination is: 29.7924764404846 Final number of output spheres is: 120 Number of polar spheres: 53 Number of nonpolar spheres: 20 Number of spheres that are near neither polar nor nonpolar receptor atoms: 47 Final number of spheres that are from crystallographic ligand: 0