usefragsph not on
There are 28 ligand heavy atoms
Ligand center of coords (x y z): 10.4380714285714 13.6470714285714 17.0718928571429
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2118
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 988
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 988
Number of spheres polar: 258, nonpolar: 604, out of current total: 988
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 0.44607 20.32037 3.68734 23.64640 7.08168 27.06599
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 288
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 236
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 178
Spheres center of coords (x y z): 12.3161490449438 14.5535216853933 15.6269901123596
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.81646657666107
Final number of output spheres is: 45
Number of polar spheres: 13
Number of nonpolar spheres: 31
Number of spheres that are near neither polar nor nonpolar receptor atoms: 1
Final number of spheres that are from crystallographic ligand: 28