usefragsph not on
There are 29 ligand heavy atoms
Ligand center of coords (x y z): 19.2841034482759 -23.2495172413793 15.1689655172414
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1360
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 926
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 921
Number of spheres polar: 257, nonpolar: 402, out of current total: 921
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 9.28570 29.27758 -33.24117 -13.51104 5.18608 25.08903
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 542
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 456
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 443
Spheres center of coords (x y z): 20.0171219638826 -26.8149347629797 14.8924846726862
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.09445922136712
Final number of output spheres is: 60
Number of polar spheres: 19
Number of nonpolar spheres: 20
Number of spheres that are near neither polar nor nonpolar receptor atoms: 21
Final number of spheres that are from crystallographic ligand: 29