usefragsph not on
There are 31 ligand heavy atoms
Ligand center of coords (x y z): 4.0308064516129 -9.43187096774193 -11.5016451612903
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1521
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 974
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 974
Number of spheres polar: 302, nonpolar: 416, out of current total: 974
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -5.91112 14.00868 -19.39357 0.54045 -21.37775 -1.52057
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 527
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 462
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 459
Spheres center of coords (x y z): 5.64413651416122 -8.2019374291939 -14.3717451198257
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.10680676421543
Final number of output spheres is: 60
Number of polar spheres: 26
Number of nonpolar spheres: 20
Number of spheres that are near neither polar nor nonpolar receptor atoms: 14
Final number of spheres that are from crystallographic ligand: 31