usefragsph not on
There are 41 ligand heavy atoms
Ligand center of coords (x y z): 18.3130975609756 8.37980487804878 15.1744634146342
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1649
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 856
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 854
Number of spheres polar: 206, nonpolar: 383, out of current total: 854
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 8.31679 28.24706 -1.49644 18.37524 5.17469 24.92226
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 514
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 447
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 414
Spheres center of coords (x y z): 17.8294753623188 11.467158236715 14.3737788647343
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.35313380063745
Final number of output spheres is: 60
Number of polar spheres: 25
Number of nonpolar spheres: 30
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 41