usefragsph not on
There are 29 ligand heavy atoms
Ligand center of coords (x y z): 3.31196551724138 11.4454482758621 24.6820344827586
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1554
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 868
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 868
Number of spheres polar: 223, nonpolar: 462, out of current total: 868
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -4.86352 13.31054 1.44880 16.52790 14.79300 34.61268
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 463
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 406
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 406
Spheres center of coords (x y z): 4.17624544334975 7.95620381773398 24.6904762561576
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.79567817052154
Final number of output spheres is: 60
Number of polar spheres: 8
Number of nonpolar spheres: 43
Number of spheres that are near neither polar nor nonpolar receptor atoms: 9
Final number of spheres that are from crystallographic ligand: 29