Enabling DOCK Developer Scripts incl Database Preparation
Intel/Linux
inactives
we got past inactivesDB.ism
actives
we got past actives.ism
node-5-17.c.bkslab.org
du2 starts
1 molecule processed, 0 errors
first try already in
then inzinc
count is 0
bzcat: Can't open input file 40: No such file or directory.
bzcat: Can't open input file 45: No such file or directory.

convert.py (Tripos MOL2 -> MDL SDF):
	mols in: 1	mols out: 1

Total: 1 mols processed.
count is 0
bzcat: Can't open input file 42: No such file or directory.
bzcat: Can't open input file 76: No such file or directory.

convert.py (Tripos MOL2 -> MDL SDF):
	mols in: 1	mols out: 1

Total: 1 mols processed.
bzcat: Can't open input file 40: No such file or directory.
bzcat: Can't open input file 45: No such file or directory.
bzcat: Can't open input file 42: No such file or directory.
bzcat: Can't open input file 76: No such file or directory.
du2.csh script updated
ligand processing
MakeDOCK 2.0, modified by J.Irwin and M.Mysinger.
Previous versions by D.M.Lorber, B.Q.Wei, A.N.Kirschner, and N.Huang
Using scripts in /raid5/people/mysinger/xyz/dockenv.
Creating binding-site residue list
Creating molecular surface

real	0m1.890s
user	0m0.220s
sys	0m0.391s
Creating sphgen spheres
 Enter name of sphere cluster file:
 Enter cluster number to process (<0 = all):  Generate surfaces as well as pdb files (<N>/Y)?  Enter name for output PDB file name:

Cluster  0:1234 spheres.
  60.  60.  65.  65.  65.  65.  99.  99.  99. 126. 126. 126. 126. 126. 128. 128. 128. 248. 253. 253. 253. 256. 256. 256. 256. 256. 256. 256. 256. 256. 256. 256. 256. 256. 256. 258. 258. 262. 262. 262. 262. 262. 262. 262. 262. 262. 262. 262. 262. 263. 263. 263. 263. 263. 263. 263. 263. 265. 265. 265. 265. 265. 265. 265. 265. 265. 265. 265. 265. 265. 265. 265. 265. 266. 266. 266. 266. 266. 267. 267. 267. 272. 274. 275. 275. 275. 275. 275. 275. 275. 276. 276. 280. 282. 282. 282. 282. 282. 282. 284. 284. 284. 284. 284. 284. 284. 289. 289. 289. 289. 289. 289. 289. 289. 292. 292. 297. 297. 297. 297. 297. 297. 297. 297. 297. 297. 297. 297. 297. 297. 297. 297. 297. 297. 297. 297. 297. 297. 298. 298. 298. 298. 298. 298. 298. 298. 298. 298. 298. 298. 300. 301. 301. 301. 301. 302. 302. 303. 303. 303. 303. 303. 303. 303. 303. 303. 303. 303. 303. 303. 303. 303. 303. 303. 303. 303. 303. 303. 303. 303. 303. 303. 303. 303. 303. 303. 304. 304. 304. 304. 304. 304. 304. 304. 304. 304. 304. 304. 304. 304. 304. 304. 304. 304. 304. 304. 305. 305. 305. 305. 305. 305. 305. 305. 305. 305. 305. 305. 305. 305. 305. 305. 305. 305. 305. 305. 305. 305. 305. 305. 305. 305. 305. 305. 305. 305. 306. 306. 306. 306. 306. 306. 306. 312. 312. 312. 312. 312. 312. 312. 312. 312. 318. 318. 318. 318. 318. 318. 318. 318. 323. 323. 323. 324. 324. 324. 324. 324. 324. 324. 324. 324. 324. 324. 324. 324. 324. 324. 324. 324. 324. 324. 325. 325. 325. 325. 325. 325. 326. 326. 326. 326. 326. 326. 326. 326. 326. 326. 326. 326. 326. 326. 326. 326. 326. 326. 326. 326. 326. 328. 328. 331. 331. 331. 331. 331. 331. 331. 331. 331. 331. 331. 331. 331. 331. 331. 331. 331. 344. 344. 344. 344. 344. 346. 346. 347. 347. 347. 347. 347. 347. 347. 347. 347. 347. 347. 353. 353. 353. 353. 354. 354. 354. 354. 354. 354. 354. 354. 354. 355. 355. 355. 356. 356. 356. 356. 356. 356. 356. 356. 356. 356. 356. 356. 356. 356. 356. 356. 356. 356. 356. 356. 356. 356. 356. 356. 356. 356. 356. 356. 356. 356. 356. 356. 356. 356. 356. 396. 396. 396. 396. 396. 396. 396. 396. 504. 504. 504. 504. 505. 505. 508. 508. 509. 509. 509. 509. 513. 513. 513. 513. 513. 513. 513. 513. 513. 513. 618. 618. 622. 629. 629. 629. 629. 629. 629. 629. 629. 629. 629. 629. 629. 629. 629. 629. 629. 630. 638. 638. 638. 643. 645. 645. 645. 645. 645. 645. 645. 645. 645. 645. 645. 645. 645. 645. 645. 645. 645. 645. 645. 645. 645. 645. 656. 656. 656. 656. 656. 656. 657. 657. 657. 657. 657. 657. 657. 660. 660. 661. 661. 667. 667. 667. 667. 667. 667. 667. 667. 667. 667. 667. 667. 667. 667. 667. 667. 667. 667. 668. 668. 668. 668. 668. 668. 668. 668. 668. 668. 668. 669. 669. 669. 669. 669. 669. 669. 669. 669. 669. 669. 669. 669. 669. 669. 676. 676. 676. 676. 676. 676. 676. 692. 692. 692. 696. 696. 696. 696. 696. 696. 696. 697. 697. 697. 697. 697. 697. 697. 697. 697. 697. 697. 697. 697. 698. 698. 698. 698. 698. 698. 698. 698. 711. 713. 714. 718. 719. 720. 721. 721. 721. 721. 721. 721. 721. 721. 721. 721. 721. 721. 721. 722. 725. 726. 726. 726. 726. 726. 726. 726. 726. 726. 726. 726. 727. 727. 727. 727. 727. 727. 727. 727. 727. 727. 727. 727. 728. 728. 728. 728. 728. 728. 728. 728. 728. 728. 728. 728. 729. 729. 729. 729. 729. 729. 729. 729. 730. 730. 730. 730. 730. 730. 730. 730. 730. 730. 730. 730. 730. 730. 730. 730. 730. 730. 730. 730. 730. 730. 730. 730. 738. 738. 738. 738. 738. 738. 738. 738. 738. 738. 738. 738. 738. 738. 738. 739. 739. 740. 744. 747. 749. 753. 753. 754. 754. 754. 754. 755. 756. 756. 756. 756. 756. 757. 760. 761. 761. 761. 761. 762. 762. 762. 762. 762. 762. 762. 762. 762. 762. 762. 762. 762. 762. 762. 762. 762. 762. 762. 762. 762. 762. 762. 763. 765. 765. 765. 766. 766. 766. 766. 767. 768. 768. 768. 768. 769. 769. 769. 769. 769. 769. 769. 769. 769. 769. 769. 769. 769. 769. 770. 770. 770. 770. 770. 770. 770. 770. 770. 770. 770. 770. 770. 770. 770. 770. 770. 770. 771. 771. 771. 771. 771. 771. 771. 771. 771. 771. 771. 771. 771. 772. 772. 772. 773. 773. 773. 775. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 777. 777. 777. 777. 777. 777. 777. 777. 777. 777. 777. 777. 777. 786. 786. 786. 786. 786. 786. 786. 786. 786. 786. 786. 786. 786. 906. 906. 906. 906. 906. 906. 907. 907. 907. 907. 907. 908. 908. 908. 908. 908. 908. 908. 908. 910. 912. 912. 912. 912. 912. 912. 913. 913. 913. 914. 914. 914. 914. 914. 914. 914. 914. 914. 914. 914. 914. 914. 914. 914. 914. 914. 914. 914. 914. 915. 915. 915. 916. 916. 916. 916. 916. 916. 916. 916. 916. 916. 916. 916. 916. 916. 916. 916. 916. 916. 916. 916. 916. 916. 916. 916. 916. 916. 916. 916. 916. 916. 916. 916. 916. 916. 917. 917. 920. 921. 921. 921. 921. 924. 926. 926. 927. 927. 928. 928. 930. 930. 930. 930. 930. 930. 930. 930. 930. 930. 930. 930. 930. 930. 930. 930. 930. 930. 930. 930. 930. 930. 930. 930. 930. 930. 931. 931. 931. 931. 931. 931. 931. 931. 931. 932. 932. 932. 932. 932. 932. 932. 932. 932. 932. 932. 932. 934. 934. 934. 935. 940. 940. 941. 941. 941. 941. 945. 945. 945. 945. 948. 948. 948. 948. 948. 948. 948. 948. 950. 950. 950. 950. 950. 950. 950. 950. 950. 950. 950. 950. 950. 950. 950. 950. 952. 952. 964. 964. 964. 964. 964. 964. 964. 964. 964. 964. 964. 964. 981. 981. 981. 981. 981.1054.1055.1055.1055.1055.1055.1055.1055.1056.1070.1071.1071.1071.1071.1080.1081.1081.1081.1081.1081.1081.1081.1081.1081.1081.1082.1082.1082.1082.1086.1086.1086.1086.1086.1086.1086.1086.1086.1086.1086.1086.1086.1086.1086.1086.1087.1087.1087.1087.1087.1087.1087.1088.1089.1275.1275.1275.1275.1275.1275.1275.1275.1275.1277.1277.1277.1277.1277.1277.1277.1277.1278.1278.1278.1278.1278.1278.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1281.1281.1281.1281.1286.1286.1289.1289.1289.1289.1294.1294.1294.1304.1305.1305.1306.1306.1307.1307.1307.1307.1307.1314.1314.1314.1314.1314.1316.1316.1316.1316.1316.1316.1316.1316.1316.1316.1316.1323.1323.1323.1323.1323.1323.1323.1323.1323.1323.1323.1323.1323.1323.1323.1323.1323.1323.1323.1323.1323.1323.1331.1331.FORTRAN STOP

Converting ligand atoms to spheres
 Enter name of sphere cluster file:
 Enter cluster number to process (<0 = all):  Generate surfaces as well as pdb files (<N>/Y)?  Enter name for output PDB file name:

Cluster  1:  28 spheres.
   1.   2.   3.   4.   5.   6.   7.   8.   9.  10.  11.  12.  13.  14.  15.  16.  17.  18.  19.  20.  21.  22.  23.  24.  25.  26.  27.  28.FORTRAN STOP

Adding essential hydrogens to receptor
Generating matching spheres for delphi
 Enter name of sphere cluster file:
 Enter cluster number to process (<0 = all):  Generate surfaces as well as pdb files (<N>/Y)?  Enter name for output PDB file name:

Cluster  1: 120 spheres.
9001.9002.9003.9004.9005.9006.9007.9008.9009.9010.9011.9012.9013.9014.9015.9016.9017.9018.9019.9020.9021.9022.9023.9024.9025.9026.9027.9028.9029.9030.9031.9032.9033.9034.9035.9036.9037.9038.9039.9040.9041.9042.9043.9044.9045.9046.9047.9048.9049.9050.9051.9052.9053.9054.9055.9056.9057.9058.9059.9060.9061.9062.9063.9064.9065.9066.9067.9068.9069.9070.9071.9072.9073.9074.9075.9076.9077.9078.9079.9080.9081.9082.9083.9084.9085.9086.9087.9088.9089.9090.9091.9092.9093.9094.9095.9096.9097.9098.9099.9100.9101.9102.9103.9104.9105.9106.9107.9108.9109.9110.9111.9112.9113.9114.9115.9116.9117.9118.9119.9120.FORTRAN STOP

Generating faster matching2 spheres for docking
 Enter name of sphere cluster file:
 Enter cluster number to process (<0 = all):  Generate surfaces as well as pdb files (<N>/Y)?  Enter name for output PDB file name:

Cluster  1:  45 spheres.
9001.9002.9003.9004.9005.9006.9007.9008.9009.9010.9011.9012.9013.9014.9015.9016.9017.9018.9019.9020.9021.9022.9023.9024.9025.9026.9027.9028.9029.9030.9031.9032.9033.9034.9035.9036.9037.9038.9039.9040.9041.9042.9043.9044.9045.FORTRAN STOP

Coloring matching spheres
Generating slower matching3 spheres for docking
 Enter name of sphere cluster file:
 Enter cluster number to process (<0 = all):  Generate surfaces as well as pdb files (<N>/Y)?  Enter name for output PDB file name:

Cluster  1:  60 spheres.
9001.9002.9003.9004.9005.9006.9007.9008.9009.9010.9011.9012.9013.9014.9015.9016.9017.9018.9019.9020.9021.9022.9023.9024.9025.9026.9027.9028.9029.9030.9031.9032.9033.9034.9035.9036.9037.9038.9039.9040.9041.9042.9043.9044.9045.9046.9047.9048.9049.9050.9051.9052.9053.9054.9055.9056.9057.9058.9059.9060.FORTRAN STOP

Coloring matching spheres
Adding spheres to electrostatic grid
Creating DelPhi electrostatic grid

real	0m26.295s
user	0m24.481s
sys	0m0.623s
Adding spheres to tarted electrostatic grid
Creating DelPhi electrostatic grid

real	0m26.153s
user	0m24.387s
sys	0m0.600s
Creating box around spheres
Creating chemgrid maps

real	0m10.383s
user	0m9.889s
sys	0m0.235s
Atomic solvent excluded volume calculations underway
FORTRAN STOP

real	20m30.579s
user	20m30.124s
sys	0m0.019s
Checking for WARNINGS in OUTPARM.
Checking for WARNINGS in delphi.log.
End of MakeDOCK sphere and grid generation.
Grid preparation completed normally.
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
Traceback (most recent call last):
  File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ?
    result = server.qsubset(data, 'db')
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__
    return self.__send(self.__name, args)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request
    verbose=self.__verbose
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request
    return self._parse_response(h.getfile(), sock)
  File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response
    return u.close()
  File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close
    raise Fault(**self._stack[0])
xmlrpclib.Fault: <Fault 1: "exceptions.IOError:[Errno 2] No such file or directory: '/raid1/people/www/subsets/4094912148/db.db.gz'">
slept 360 waiting for decoys
going into second inactives test
after second inactives finished
ssh_askpass: exec(/usr/libexec/openssh/ssh-askpass): No such file or directory
ssh_askpass: exec(/usr/libexec/openssh/ssh-askpass): No such file or directory
Permission denied, please try again.
ssh_askpass: exec(/usr/libexec/openssh/ssh-askpass): No such file or directory
Permission denied, please try again.
ssh_askpass: exec(/usr/libexec/openssh/ssh-askpass): No such file or directory
Permission denied (publickey,gssapi-with-mic,password).
                             FILTER PROGRAM

           THIS PROGRAM FILTERS ATOMIC COORDINATE FILES
             BASED ON DISTANCE AND SEQUENCE CRITERIA


name of file to filter by -
 xtal-lig.pdb                                                                    
 filter by atom names or numbers in receptor(na/nu)?
 residue/ligand orientation number increment filter?
  -100000
 Filter for MS run?(Y/N)
 N                                                                               
 Either names or numbers of the atoms to filter by, as 
 they appear in the pdb, with boolean and/or operators 
 if such apply between them.  Maximum of one boolean 
 per two filter atoms.
 name of ligand file-
 rec.pdb                                                                         
 names of ligand atoms to match against receptor 
 filters.  Include boolean and/ors between EACH 
 atom specified.
 LIGAND ATOM           1ISALL 
 internal filtering?
Y  
 distance cutoffs for each of the receptor atoms         specified-
    25.00000    
 output filename-
 poc.txt                                                                         
 number of allowed ligand contacts in an all-filter?
 LIGBUM IS-           0
 IR IS          43
 Number of atoms in ligand -            0
 IL IS        1653
 NR IS-           1
 INTERNAL BEGUN
 INTERNAL COMPLETED
           23
 NUMLIG IS-          23
 TOTAL NUMBER OF ORIENTATIONS WRITEN IS -           0
 filtering complete
mf7.csh  - site preparation complete, preliminary docking queued
Unmatched ".