usefragsph not on
There are 28 ligand heavy atoms
Ligand center of coords (x y z): 2.64460714285714 10.5981428571429 25.3890714285714
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1505
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 886
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 886
Number of spheres polar: 251, nonpolar: 438, out of current total: 886
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -6.56225 12.61883 0.60033 16.37386 15.68505 34.75771
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 286
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 240
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 238
Spheres center of coords (x y z): 3.86795180672269 7.31614180672269 25.0730776470588
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.78951261820234
Final number of output spheres is: 45
Number of polar spheres: 5
Number of nonpolar spheres: 30
Number of spheres that are near neither polar nor nonpolar receptor atoms: 10
Final number of spheres that are from crystallographic ligand: 28