usefragsph not on
There are 29 ligand heavy atoms
Ligand center of coords (x y z): 2.52762068965517 10.5531724137931 25.2715862068966
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1481
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 852
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 852
Number of spheres polar: 229, nonpolar: 441, out of current total: 852
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -5.89601 12.51593 0.56380 16.05747 15.32553 35.18651
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 462
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 403
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 400
Spheres center of coords (x y z): 4.13822075 7.64573522499999 24.8105526
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.55647037597296
Final number of output spheres is: 60
Number of polar spheres: 5
Number of nonpolar spheres: 43
Number of spheres that are near neither polar nor nonpolar receptor atoms: 12
Final number of spheres that are from crystallographic ligand: 29