usefragsph not on
There are 24 ligand heavy atoms
Ligand center of coords (x y z): 3.59016666666667 33.9465833333333 24.5089583333333
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1426
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 770
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 770
Number of spheres polar: 182, nonpolar: 444, out of current total: 770
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -4.72316 13.56517 28.89682 43.92460 14.58479 34.44088
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 439
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 392
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 390
Spheres center of coords (x y z): 4.38568815384615 37.6170861538462 24.2302078974359
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.22763851116972
Final number of output spheres is: 60
Number of polar spheres: 16
Number of nonpolar spheres: 41
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 24