usefragsph not on
There are 23 ligand heavy atoms
Ligand center of coords (x y z): 1.92339130434783 10.0037826086957 25.8665217391304
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1376
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 886
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 886
Number of spheres polar: 232, nonpolar: 470, out of current total: 886
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -8.04566 11.89990 0.08612 16.11975 16.33900 35.81626
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 454
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 391
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 378
Spheres center of coords (x y z): 3.78251452380953 7.75339584656085 25.3663527513228
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.93467281933027
Final number of output spheres is: 60
Number of polar spheres: 12
Number of nonpolar spheres: 47
Number of spheres that are near neither polar nor nonpolar receptor atoms: 1
Final number of spheres that are from crystallographic ligand: 23