There are 12 ligand heavy atoms Ligand center of coords (x y z): 4.52033333333333 13.5575 24.3595 useligsph not on Starting number of spheres from sph/sph cluster 0: 1174 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 932 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 932 Number of spheres polar: 298, nonpolar: 485, out of current total: 932 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -7.45567 16.49157 1.64932 25.54534 13.07323 36.29927 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 286 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 222 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 4.52033333333333 13.5575 24.3595 Center point: 184 xyz: 4.37694 13.64445 24.52897 After continuity checking, number of spheres is: 203 Spheres center of coords (x y z): 5.09844871921183 8.67416009852216 25.2557199507389 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 0.225603526448364 14.736326952141 20.3256508816121 Average weighted-distance for final elimination is: 25.8291227306191 Final number of output spheres is: 120 Number of polar spheres: 46 Number of nonpolar spheres: 60 Number of spheres that are near neither polar nor nonpolar receptor atoms: 14 Final number of spheres that are from crystallographic ligand: 0