name of input pdb file: rec.crg name of output contact grid file: solvmap_sev atomic radii (A): 1. for O N C S P Other [1.4 1.3 1.7 2.22.2 1.8]? 1.600000 1.650000 1.900000 1.900000 1.900000 1.600000 2. for water probe (exclusion) [1.4]? 1.400000 number of grid points/angstrom?(1-4) 2 pdb file of limiting box: box assumed ligand atomic radius (A): 1.400000 maximum receptor atomic radius (A): 1.900000 grid resolution (A): 0.5000000 integration cutoff (A): 10.00000 receptor minimum and maximum x y z (A): -15.77700 -23.53000 -3.579000 33.46700 19.99200 37.46000 box minimum and maximum x y z (A): -12.70200 -22.17300 -5.155000 26.67100 20.54600 31.93000 dielectric grid expansion size (points/edge) 13 9 3 20 5 18 dielectric grid minimum and maximum x y z (A): -19.20200 -26.67300 -6.655000 36.67100 23.04600 40.93000 solvation grid x, y, z dimensions: 78 85 74 finished receptor accessible surface finished initializing dielectric grid finished creating receptor molecular surface grid dV is 9.9471835E-03 Precalculating solvmap lookup table Starting solvmap calculation. 1 / 75 the way there! 2 / 75 the way there! 3 / 75 the way there! 4 / 75 the way there! 5 / 75 the way there! 6 / 75 the way there! 7 / 75 the way there! 8 / 75 the way there! 9 / 75 the way there! 10 / 75 the way there! 11 / 75 the way there! 12 / 75 the way there! 13 / 75 the way there! 14 / 75 the way there! 15 / 75 the way there! 16 / 75 the way there! 17 / 75 the way there! 18 / 75 the way there! 19 / 75 the way there! 20 / 75 the way there! 21 / 75 the way there! 22 / 75 the way there! 23 / 75 the way there! 24 / 75 the way there! 25 / 75 the way there! 26 / 75 the way there! 27 / 75 the way there! 28 / 75 the way there! 29 / 75 the way there! 30 / 75 the way there! 31 / 75 the way there! 32 / 75 the way there! 33 / 75 the way there! 34 / 75 the way there! 35 / 75 the way there! 36 / 75 the way there! 37 / 75 the way there! 38 / 75 the way there! 39 / 75 the way there! 40 / 75 the way there! 41 / 75 the way there! 42 / 75 the way there! 43 / 75 the way there! 44 / 75 the way there! 45 / 75 the way there! 46 / 75 the way there! 47 / 75 the way there! 48 / 75 the way there! 49 / 75 the way there! 50 / 75 the way there! 51 / 75 the way there! 52 / 75 the way there! 53 / 75 the way there! 54 / 75 the way there! 55 / 75 the way there! 56 / 75 the way there! 57 / 75 the way there! 58 / 75 the way there! 59 / 75 the way there! 60 / 75 the way there! 61 / 75 the way there! 62 / 75 the way there! 63 / 75 the way there! 64 / 75 the way there! 65 / 75 the way there! 66 / 75 the way there! 67 / 75 the way there! 68 / 75 the way there! 69 / 75 the way there! 70 / 75 the way there! 71 / 75 the way there! 72 / 75 the way there! 73 / 75 the way there! 74 / 75 the way there! 75 / 75 the way there! successful completion elapsed time (sec): 1297.6200 Mon Oct 10 14:22:43 PDT 2011 rec.crg solvmap_sev 1.60,1.65,1.90,1.90,1.90,1.60 1.4 2 box 1.4 EOI # receptor file # output grid file # radii of oxygen, nitrogen, carbon, sulfur, phosphorus, and "other" atoms. # radius of probe # grid resolution # box file # born radius of ligand atom