There are 16 ligand heavy atoms Ligand center of coords (x y z): 7.1399375 -1.705125 9.468375 useligsph not on Starting number of spheres from sph/sph cluster 0: 891 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 768 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 768 Number of spheres polar: 302, nonpolar: 347, out of current total: 768 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -4.83683 17.86391 -13.60600 8.53540 -2.17388 21.37004 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 271 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 218 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 7.1399375 -1.705125 9.468375 Center point: 19 xyz: 6.84847 -1.69963 9.68933 After continuity checking, number of spheres is: 194 Spheres center of coords (x y z): 4.87373907216495 -2.00422030927835 5.22593721649484 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 5.10770521091812 0.401020843672457 14.7034248138958 Average weighted-distance for final elimination is: 25.3459650458733 Final number of output spheres is: 120 Number of polar spheres: 58 Number of nonpolar spheres: 46 Number of spheres that are near neither polar nor nonpolar receptor atoms: 16 Final number of spheres that are from crystallographic ligand: 0