usefragsph not on
There are 27 ligand heavy atoms
Ligand center of coords (x y z): 2.12725925925926 3.3127037037037 19.2496666666667
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1104
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 695
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 694
Number of spheres polar: 212, nonpolar: 272, out of current total: 694
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -7.86890 11.86922 -6.52268 13.23944 9.33259 29.21399
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 394
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 343
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 326
Spheres center of coords (x y z): -1.07170343558282 2.95651987730061 18.1144045705521
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.08308053186052
Final number of output spheres is: 60
Number of polar spheres: 20
Number of nonpolar spheres: 26
Number of spheres that are near neither polar nor nonpolar receptor atoms: 14
Final number of spheres that are from crystallographic ligand: 27