usefragsph not on
There are 26 ligand heavy atoms
Ligand center of coords (x y z): 3.29942307692308 11.5310384615385 24.7801923076923
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1569
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 882
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 882
Number of spheres polar: 198, nonpolar: 500, out of current total: 882
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -5.01425 13.28119 1.55060 16.27717 14.79684 34.76379
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 280
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 225
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 218
Spheres center of coords (x y z): 4.46772568807339 7.70920518348624 25.5780691284403
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.38914392581973
Final number of output spheres is: 45
Number of polar spheres: 13
Number of nonpolar spheres: 29
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 26