usefragsph not on
There are 23 ligand heavy atoms
Ligand center of coords (x y z): 40.2103043478261 15.0854347826087 61.9732173913043
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1427
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 768
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 768
Number of spheres polar: 234, nonpolar: 410, out of current total: 768
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 30.22415 50.18927 5.13985 25.07828 51.98477 71.84756
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 403
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 350
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 340
Spheres center of coords (x y z): 41.6585647058824 17.3881764411765 59.7479785294118
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.52477333268528
Final number of output spheres is: 60
Number of polar spheres: 32
Number of nonpolar spheres: 28
Number of spheres that are near neither polar nor nonpolar receptor atoms: 0
Final number of spheres that are from crystallographic ligand: 23