usefragsph not on
There are 24 ligand heavy atoms
Ligand center of coords (x y z): 39.8314583333333 16.0576666666667 62.5785416666667
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1712
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 962
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 962
Number of spheres polar: 260, nonpolar: 527, out of current total: 962
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 29.86792 49.81957 6.21699 26.04106 52.58340 70.88754
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 510
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 440
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 427
Spheres center of coords (x y z): 41.0173525761124 18.6233161358314 60.4063805620609
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.27799492016925
Final number of output spheres is: 60
Number of polar spheres: 26
Number of nonpolar spheres: 34
Number of spheres that are near neither polar nor nonpolar receptor atoms: 0
Final number of spheres that are from crystallographic ligand: 24