usefragsph not on
There are 34 ligand heavy atoms
Ligand center of coords (x y z): 40.0728823529412 17.8798529411765 64.5643235294118
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1761
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1014
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1014
Number of spheres polar: 269, nonpolar: 573, out of current total: 1014
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 30.09454 50.07117 8.05494 27.87207 54.57746 74.55904
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 301
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 252
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 234
Spheres center of coords (x y z): 41.566201025641 18.8524238888889 62.0919977777778
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.37328528192926
Final number of output spheres is: 45
Number of polar spheres: 13
Number of nonpolar spheres: 30
Number of spheres that are near neither polar nor nonpolar receptor atoms: 2
Final number of spheres that are from crystallographic ligand: 34