usefragsph not on
There are 31 ligand heavy atoms
Ligand center of coords (x y z): -28.9641612903226 58.5569677419355 -8.27187096774194
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1646
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 873
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 869
Number of spheres polar: 288, nonpolar: 328, out of current total: 869
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -38.78506 -18.98279 48.58974 68.33514 -18.23367 1.69145
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 484
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 420
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 394
Spheres center of coords (x y z): -27.5395391878173 58.7654965482234 -7.17887416243655
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.36278368383159
Final number of output spheres is: 60
Number of polar spheres: 17
Number of nonpolar spheres: 21
Number of spheres that are near neither polar nor nonpolar receptor atoms: 22
Final number of spheres that are from crystallographic ligand: 31