usefragsph not on
There are 24 ligand heavy atoms
Ligand center of coords (x y z): 17.0669583333333 15.5446666666667 8.74095833333333
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1811
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1004
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1004
Number of spheres polar: 175, nonpolar: 591, out of current total: 1004
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 7.13834 27.06474 5.66949 25.54200 -1.21239 18.69591
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 344
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 298
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 269
Spheres center of coords (x y z): 19.6014792936803 14.6233470260223 11.7307435687732
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.54503294206514
Final number of output spheres is: 45
Number of polar spheres: 11
Number of nonpolar spheres: 30
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 24