There are 5 ligand heavy atoms Ligand center of coords (x y z): 6.505 -34.9384 41.5352 useligsph not on Starting number of spheres from sph/sph cluster 0: 207 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 206 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 206 Number of spheres polar: 59, nonpolar: 108, out of current total: 206 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -4.64646 18.24838 -46.06281 -29.09083 31.14724 43.67316 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 83 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 72 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 6.505 -34.9384 41.5352 Center point: 35 xyz: 10.22006 -35.14700 41.85538 After continuity checking, number of spheres is: 63 Final number of output spheres is: 63 Number of polar spheres: 16 Number of nonpolar spheres: 32 Number of spheres that are near neither polar nor nonpolar receptor atoms: 15 Final number of spheres that are from crystallographic ligand: 0