usefragsph not on
There are 21 ligand heavy atoms
Ligand center of coords (x y z): 39.2947142857143 51.7874761904762 -79.978380952381
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1451
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 682
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 682
Number of spheres polar: 143, nonpolar: 368, out of current total: 682
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 29.30004 49.27900 41.88057 61.77349 -85.03180 -70.02480
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 364
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 317
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 267
Spheres center of coords (x y z): 42.1230872659176 54.2281887265917 -78.2674295131087
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.83141441017803
Final number of output spheres is: 60
Number of polar spheres: 14
Number of nonpolar spheres: 36
Number of spheres that are near neither polar nor nonpolar receptor atoms: 10
Final number of spheres that are from crystallographic ligand: 21