usefragsph not on
There are 23 ligand heavy atoms
Ligand center of coords (x y z): 9.74804347826087 32.655 60.865
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1442
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 735
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 735
Number of spheres polar: 174, nonpolar: 376, out of current total: 735
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -0.25184 19.74520 22.66047 42.58821 55.42958 70.73601
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 381
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 323
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 265
Spheres center of coords (x y z): 6.69868362264151 29.9047216603774 62.0719213962264
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.30462071106119
Final number of output spheres is: 60
Number of polar spheres: 20
Number of nonpolar spheres: 35
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 23