usefragsph not on
There are 23 ligand heavy atoms
Ligand center of coords (x y z): 27.5793043478261 49.8330434782609 -13.1919565217391
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1684
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 653
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 653
Number of spheres polar: 145, nonpolar: 398, out of current total: 653
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 17.66547 37.56944 39.89746 59.79549 -23.08576 -3.22367
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 326
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 274
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 242
Spheres center of coords (x y z): 24.9182418181818 51.3872123140496 -16.0990568595041
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.83092825552902
Final number of output spheres is: 60
Number of polar spheres: 12
Number of nonpolar spheres: 42
Number of spheres that are near neither polar nor nonpolar receptor atoms: 6
Final number of spheres that are from crystallographic ligand: 23