Distance from surface specified: 1.80 There are 37 ligand heavy atoms Ligand center of coords (x y z): -10.1878378378378 2.21567567567568 26.7315675675676 Using crystallographic ligand as spheres for output Starting number of spheres from sph/sph cluster 0: 12301 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (14 angstroms): 8963 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<2 angstroms): 8649 Number of spheres polar: 4126, nonpolar: 3880, out of current total: 8649 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -20.33800 3.35100 -11.78220 16.21100 12.74620 40.70760 Number of spheres after removing spheres too close to each other (approximately <1.4 angstroms): 1283 Number of spheres after second pass removing spheres absolutely <0.9 from each other: 710 Crystallographic spheres are present, so doing continuity based on crystallographic spheres After continuity checking, number of spheres is: 680 Spheres center of coords (x y z): -12.6851717647059 2.24781088235294 27.0378638235294 Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8) Average weighted-distance for final elimination is: 10.3620791495644 Final number of output spheres is: 200 Number of polar spheres: 82 Number of nonpolar spheres: 109 Number of spheres that are near neither polar nor nonpolar receptor atoms: 9 Final number of spheres that are from crystallographic ligand: 37