usefragsph not on
There are 23 ligand heavy atoms
Ligand center of coords (x y z): 114.235826086957 65.5042608695652 9.55786956521739
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1242
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 721
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 721
Number of spheres polar: 221, nonpolar: 374, out of current total: 721
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 104.29684 123.77122 55.52437 75.47220 -0.37275 19.38778
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 387
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 339
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 287
Spheres center of coords (x y z): 110.622124181185 65.0169414982578 10.4279463066202
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.97647050616658
Final number of output spheres is: 60
Number of polar spheres: 21
Number of nonpolar spheres: 37
Number of spheres that are near neither polar nor nonpolar receptor atoms: 2
Final number of spheres that are from crystallographic ligand: 23