usefragsph not on
There are 28 ligand heavy atoms
Ligand center of coords (x y z): 42.6436785714286 2.83160714285714 -4.43892857142857
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1388
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 750
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 750
Number of spheres polar: 152, nonpolar: 389, out of current total: 750
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 32.66491 52.19507 -7.00471 12.44845 -14.06144 5.49304
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 287
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 239
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 221
Spheres center of coords (x y z): 41.9138563800905 0.0295155203619904 -5.38274371040724
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.04796445034794
Final number of output spheres is: 45
Number of polar spheres: 13
Number of nonpolar spheres: 26
Number of spheres that are near neither polar nor nonpolar receptor atoms: 6
Final number of spheres that are from crystallographic ligand: 28