usefragsph not on
There are 28 ligand heavy atoms
Ligand center of coords (x y z): 42.6436785714286 2.83160714285714 -4.43892857142857
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1388
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 750
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 750
Number of spheres polar: 152, nonpolar: 389, out of current total: 750
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 32.66491 52.19507 -7.00471 12.44845 -14.06144 5.49304
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 440
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 389
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 383
Spheres center of coords (x y z): 41.7519854046997 0.764917075718016 -4.82093939947781
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.16293082116998
Final number of output spheres is: 60
Number of polar spheres: 14
Number of nonpolar spheres: 41
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 28