usefragsph not on
There are 24 ligand heavy atoms
Ligand center of coords (x y z): 0.337375 3.5065 25.09575
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1076
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 692
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 690
Number of spheres polar: 217, nonpolar: 298, out of current total: 690
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -9.58141 10.24035 -5.96183 13.47916 15.21300 34.95387
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 392
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 347
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 285
Spheres center of coords (x y z): -1.59050452631579 5.5728569122807 22.6867969824561
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.60873740055037
Final number of output spheres is: 60
Number of polar spheres: 19
Number of nonpolar spheres: 38
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 24