usefragsph not on
There are 11 ligand heavy atoms
Ligand center of coords (x y z): 34.0509090909091 40.2232727272727 36.3876363636364
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1145
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 712
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 712
Number of spheres polar: 254, nonpolar: 337, out of current total: 712
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 24.08000 43.96924 30.22870 50.18501 26.50164 46.37327
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 373
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 312
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 245
Spheres center of coords (x y z): 30.007242244898 38.2530697959184 38.9678128979592
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.57469032706738
Final number of output spheres is: 60
Number of polar spheres: 25
Number of nonpolar spheres: 35
Number of spheres that are near neither polar nor nonpolar receptor atoms: 0
Final number of spheres that are from crystallographic ligand: 11