There are 20 ligand heavy atoms Ligand center of coords (x y z): 41.39855 24.5509 110.65515 useligsph not on Starting number of spheres from sph/sph cluster 0: 1150 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 916 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 900 Number of spheres polar: 324, nonpolar: 404, out of current total: 900 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 30.17441 53.37149 12.84430 36.54916 98.68638 122.64662 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 329 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 253 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 41.39855 24.5509 110.65515 Center point: 164 xyz: 41.03600 25.28848 110.87905 After continuity checking, number of spheres is: 117 Final number of output spheres is: 117 Number of polar spheres: 22 Number of nonpolar spheres: 51 Number of spheres that are near neither polar nor nonpolar receptor atoms: 44 Final number of spheres that are from crystallographic ligand: 0