usefragsph not on
There are 36 ligand heavy atoms
Ligand center of coords (x y z): 8.97588888888889 39.1217777777778 30.2191388888889
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2075
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 828
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 827
Number of spheres polar: 186, nonpolar: 462, out of current total: 827
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -0.99643 18.97533 29.17671 49.11959 20.36268 40.21694
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 288
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 243
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 192
Spheres center of coords (x y z): 7.57024302083333 37.72014125 33.2551369270833
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.79169977436833
Final number of output spheres is: 45
Number of polar spheres: 8
Number of nonpolar spheres: 31
Number of spheres that are near neither polar nor nonpolar receptor atoms: 6
Final number of spheres that are from crystallographic ligand: 36