usefragsph not on
There are 24 ligand heavy atoms
Ligand center of coords (x y z): 28.4003333333333 14.7000416666667 14.425125
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1904
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 934
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 934
Number of spheres polar: 257, nonpolar: 406, out of current total: 934
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 18.40742 38.38143 4.90094 24.64496 4.66099 24.40535
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 525
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 445
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 430
Spheres center of coords (x y z): 26.5763122558139 15.9903550465116 18.2426649069767
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 7.29057437300354
Final number of output spheres is: 60
Number of polar spheres: 5
Number of nonpolar spheres: 42
Number of spheres that are near neither polar nor nonpolar receptor atoms: 13
Final number of spheres that are from crystallographic ligand: 24