usefragsph not on
There are 35 ligand heavy atoms
Ligand center of coords (x y z): 16.951 15.2636285714286 108.357714285714
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1463
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 618
WARNING: removing a crystallographic sphere that is distance 7.00526758946438 angstroms from closest receptor atom
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 608
Number of spheres polar: 132, nonpolar: 335, out of current total: 608
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 7.17151 26.92800 5.73241 25.24475 98.36564 118.29855
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 229
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 189
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 160
Spheres center of coords (x y z): 15.4778795625 15.0510325625 106.379900375
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.80206620805675
Final number of output spheres is: 45
Number of polar spheres: 8
Number of nonpolar spheres: 24
Number of spheres that are near neither polar nor nonpolar receptor atoms: 13
Final number of spheres that are from crystallographic ligand: 34