usefragsph not on
There are 25 ligand heavy atoms
Ligand center of coords (x y z): 19.16172 15.02252 29.86028
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1784
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 900
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 900
Number of spheres polar: 211, nonpolar: 425, out of current total: 900
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 9.17731 28.70037 5.74249 25.01775 19.87618 39.85042
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 330
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 261
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 237
Spheres center of coords (x y z): 14.7681775949367 16.6286577637131 28.0503629957806
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 7.103248298158
Final number of output spheres is: 45
Number of polar spheres: 6
Number of nonpolar spheres: 30
Number of spheres that are near neither polar nor nonpolar receptor atoms: 9
Final number of spheres that are from crystallographic ligand: 25