usefragsph not on
There are 26 ligand heavy atoms
Ligand center of coords (x y z): 5.74984615384615 -15.6897307692308 0.944461538461538
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1714
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 851
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 841
Number of spheres polar: 288, nonpolar: 381, out of current total: 841
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -4.22730 15.68109 -25.61412 -6.08016 -8.97719 10.92657
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 418
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 361
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 274
Spheres center of coords (x y z): 4.10144470802919 -13.829027189781 -1.17353802919708
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.33327134422566
Final number of output spheres is: 60
Number of polar spheres: 12
Number of nonpolar spheres: 38
Number of spheres that are near neither polar nor nonpolar receptor atoms: 10
Final number of spheres that are from crystallographic ligand: 26