{ s_m_m2io_version ::: 2.0.0 } f_m_ct { s_m_title r_lp_tautomer_probability s_st_Chirality_1 s_st_Chirality_2 s_st_Chirality_3 s_st_Chirality_4 r_epik_Ionization_Penalty r_epik_Ionization_Penalty_Charging r_epik_Ionization_Penalty_Neutral r_epik_State_Penalty i_epik_Tot_Q ::: TEMP00000001 1 5_S_11_7_4_6 7_R_10_5_9_8 17_R_16_28_18_50 19_S_15_20_22_18 0.0133 0.0133 0.0000 0.0133 1 m_depend[10] { # First column is dependency index # i_m_depend_dependency s_m_depend_property ::: 1 10 r_lp_tautomer_probability 2 10 s_st_Chirality_1 3 10 s_st_Chirality_2 4 10 s_st_Chirality_3 5 10 s_st_Chirality_4 6 10 r_epik_Ionization_Penalty 7 10 r_epik_Ionization_Penalty_Charging 8 10 r_epik_Ionization_Penalty_Neutral 9 10 r_epik_State_Penalty 10 10 i_epik_Tot_Q ::: } m_atom[64] { # First column is atom index # i_m_mmod_type r_m_x_coord r_m_y_coord r_m_z_coord i_m_residue_number s_m_insertion_code s_m_mmod_res s_m_chain_name i_m_color r_m_charge1 r_m_charge2 s_m_pdb_residue_name s_m_pdb_atom_name s_m_grow_name i_m_atomic_number i_m_formal_charge i_m_representation i_m_visibility s_m_atom_name i_m_template_index r_epik_H2O_pKa r_epik_H2O_pKa_uncertainty ::: 1 3 -0.107800 1.334400 1.839900 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 2 32 0.911000 1.019800 0.829400 900 " " X " " 43 0.00000 0.00000 "UNK " " " " " 7 1 0 1 "" 0 <> <> 3 3 1.662000 2.222400 0.447100 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 4 3 2.805100 1.834100 -0.493400 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 5 3 2.227100 1.153600 -1.737400 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 6 41 3.029087 0.863415 -2.432101 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 7 3 1.409700 -0.067900 -1.308100 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 8 41 2.043959 -0.854176 -0.872801 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 9 3 0.307000 0.375600 -0.343900 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 10 56 0.833000 -0.664300 -2.434600 900 " " X " " 8 0.00000 0.00000 "UNK " " " " " 9 0 0 1 "" 0 <> <> 11 25 1.362400 2.094100 -2.454300 900 " " X " " 43 0.00000 0.00000 "UNK " " " " " 7 0 0 1 "" 0 <> <> 12 3 -0.014200 1.717300 -2.785000 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 13 2 1.833200 3.305900 -2.809600 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 14 15 3.004900 3.578600 -2.632900 900 " " X " " 70 0.00000 0.00000 "UNK " " " " " 8 0 0 1 "" 0 2.662 2.000 15 25 1.005300 4.215500 -3.360600 900 " " X " " 43 0.00000 0.00000 "UNK " " " " " 7 0 0 1 "" 0 <> <> 16 3 -0.404700 3.985000 -3.724000 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 17 3 -0.708900 5.029200 -4.824100 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 18 3 0.110100 6.251600 -4.331800 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 19 3 1.360600 5.600000 -3.704800 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 20 3 2.511600 5.606600 -4.712800 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 21 16 3.620800 4.884400 -4.174100 900 " " X " " 70 0.00000 0.00000 "UNK " " " " " 8 0 0 1 "" 0 -2.487 1.000 22 2 1.764300 6.349800 -2.461400 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 23 2 1.314100 5.929200 -1.223900 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 24 2 1.688700 6.613800 -0.082900 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 25 2 2.504600 7.725400 -0.180400 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 26 2 2.950200 8.149300 -1.418400 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 27 2 2.580200 7.461400 -2.558900 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 28 2 -2.180400 5.350200 -4.875500 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 29 2 -2.846100 5.727400 -3.724500 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 30 2 -4.197600 6.022700 -3.771800 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 31 2 -4.882700 5.940200 -4.972400 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 32 2 -4.217300 5.563100 -6.123000 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 33 2 -2.864100 5.272800 -6.076600 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 34 56 -2.212300 4.909000 -7.202700 900 " " X " " 8 0.00000 0.00000 "UNK " " " " " 9 0 0 1 "" 0 <> <> 35 56 -4.848400 6.390900 -2.646700 900 " " X " " 8 0.00000 0.00000 "UNK " " " " " 9 0 0 1 "" 0 <> <> 36 41 0.370856 1.814994 2.705878 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 37 41 -0.602853 0.406627 2.162639 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 38 41 -0.854230 2.017136 1.407796 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 39 41 0.990024 2.927044 -0.064686 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 40 41 2.075143 2.698695 1.348464 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 41 41 3.358035 2.737308 -0.790851 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 42 41 3.485544 1.141098 0.023073 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 43 41 -0.273085 -0.501956 -0.022344 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 44 41 -0.358577 1.089000 -0.851904 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 45 41 -0.502974 2.545760 -3.318623 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 46 41 -0.567385 1.500306 -1.859311 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 47 41 -0.005769 0.822939 -3.425350 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 48 41 -0.524158 2.956563 -4.095548 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 49 41 -1.040260 4.130938 -2.838130 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 50 41 -0.477662 4.697778 -5.847178 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 51 41 0.353851 6.898313 -5.187573 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 52 41 -0.483044 6.819758 -3.600106 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 53 41 2.182803 5.129612 -5.647880 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 54 41 2.814104 6.644253 -4.917169 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 55 42 4.546372 4.781043 -4.759450 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 14.160 0.800 56 41 0.673000 5.063400 -1.148200 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 57 41 1.340800 6.282400 0.884300 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 58 41 2.794200 8.262500 0.710700 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 59 41 3.587600 9.017800 -1.494500 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 60 41 2.928400 7.792600 -3.526100 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 61 41 -2.311700 5.792100 -2.788200 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 62 41 -5.937300 6.170200 -5.009200 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 63 41 -4.751700 5.498400 -7.059300 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 64 44 1.621980 0.307841 1.273946 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 8.695 1.150 ::: } m_bond[134] { # First column is bond index # i_m_from i_m_to i_m_order i_m_from_rep i_m_to_rep ::: 1 1 2 1 1 1 2 1 36 1 1 1 3 1 37 1 1 1 4 1 38 1 1 1 5 2 1 1 1 1 6 2 9 1 1 1 7 2 3 1 1 1 8 2 64 1 1 1 9 3 2 1 1 1 10 3 4 1 1 1 11 3 39 1 1 1 12 3 40 1 1 1 13 4 3 1 1 1 14 4 5 1 1 1 15 4 41 1 1 1 16 4 42 1 1 1 17 5 4 1 1 1 18 5 6 1 1 1 19 5 7 1 1 1 20 5 11 1 1 1 21 6 5 1 1 1 22 7 5 1 1 1 23 7 8 1 1 1 24 7 9 1 1 1 25 7 10 1 1 1 26 8 7 1 1 1 27 9 2 1 1 1 28 9 7 1 1 1 29 9 43 1 1 1 30 9 44 1 1 1 31 10 7 1 1 1 32 11 5 1 1 1 33 11 12 1 1 1 34 11 13 1 1 1 35 12 11 1 1 1 36 12 45 1 1 1 37 12 46 1 1 1 38 12 47 1 1 1 39 13 11 1 1 1 40 13 14 2 1 1 41 13 15 1 1 1 42 14 13 2 1 1 43 15 13 1 1 1 44 15 19 1 1 1 45 15 16 1 1 1 46 16 15 1 1 1 47 16 17 1 1 1 48 16 48 1 1 1 49 16 49 1 1 1 50 17 16 1 1 1 51 17 18 1 1 1 52 17 28 1 1 1 53 17 50 1 1 1 54 18 17 1 1 1 55 18 19 1 1 1 56 18 51 1 1 1 57 18 52 1 1 1 58 19 15 1 1 1 59 19 18 1 1 1 60 19 20 1 1 1 61 19 22 1 1 1 62 20 19 1 1 1 63 20 21 1 1 1 64 20 53 1 1 1 65 20 54 1 1 1 66 21 20 1 1 1 67 21 55 1 1 1 68 22 19 1 1 1 69 22 27 2 1 1 70 22 23 1 1 1 71 23 22 1 1 1 72 23 24 2 1 1 73 23 56 1 1 1 74 24 23 2 1 1 75 24 25 1 1 1 76 24 57 1 1 1 77 25 24 1 1 1 78 25 26 2 1 1 79 25 58 1 1 1 80 26 25 2 1 1 81 26 27 1 1 1 82 26 59 1 1 1 83 27 22 2 1 1 84 27 26 1 1 1 85 27 60 1 1 1 86 28 17 1 1 1 87 28 33 2 1 1 88 28 29 1 1 1 89 29 28 1 1 1 90 29 30 2 1 1 91 29 61 1 1 1 92 30 29 2 1 1 93 30 31 1 1 1 94 30 35 1 1 1 95 31 30 1 1 1 96 31 32 2 1 1 97 31 62 1 1 1 98 32 31 2 1 1 99 32 33 1 1 1 100 32 63 1 1 1 101 33 28 2 1 1 102 33 32 1 1 1 103 33 34 1 1 1 104 34 33 1 1 1 105 35 30 1 1 1 106 36 1 1 1 1 107 37 1 1 1 1 108 38 1 1 1 1 109 39 3 1 1 1 110 40 3 1 1 1 111 41 4 1 1 1 112 42 4 1 1 1 113 43 9 1 1 1 114 44 9 1 1 1 115 45 12 1 1 1 116 46 12 1 1 1 117 47 12 1 1 1 118 48 16 1 1 1 119 49 16 1 1 1 120 50 17 1 1 1 121 51 18 1 1 1 122 52 18 1 1 1 123 53 20 1 1 1 124 54 20 1 1 1 125 55 21 1 1 1 126 56 23 1 1 1 127 57 24 1 1 1 128 58 25 1 1 1 129 59 26 1 1 1 130 60 27 1 1 1 131 61 29 1 1 1 132 62 31 1 1 1 133 63 32 1 1 1 134 64 2 1 1 1 ::: } } f_m_ct { s_m_title r_lp_tautomer_probability s_st_Chirality_1 s_st_Chirality_2 s_st_Chirality_3 s_st_Chirality_4 r_epik_Ionization_Penalty r_epik_Ionization_Penalty_Charging r_epik_Ionization_Penalty_Neutral r_epik_State_Penalty i_epik_Tot_Q ::: TEMP00000002 1 5_S_11_7_4_6 7_R_10_5_9_8 17_S_16_28_18_50 19_S_15_20_22_18 0.0133 0.0133 0.0000 0.0133 1 m_depend[10] { # First column is dependency index # i_m_depend_dependency s_m_depend_property ::: 1 10 r_lp_tautomer_probability 2 10 s_st_Chirality_1 3 10 s_st_Chirality_2 4 10 s_st_Chirality_3 5 10 s_st_Chirality_4 6 10 r_epik_Ionization_Penalty 7 10 r_epik_Ionization_Penalty_Charging 8 10 r_epik_Ionization_Penalty_Neutral 9 10 r_epik_State_Penalty 10 10 i_epik_Tot_Q ::: } m_atom[64] { # First column is atom index # i_m_mmod_type r_m_x_coord r_m_y_coord r_m_z_coord i_m_residue_number s_m_insertion_code s_m_mmod_res s_m_chain_name i_m_color r_m_charge1 r_m_charge2 s_m_pdb_residue_name s_m_pdb_atom_name s_m_grow_name i_m_atomic_number i_m_formal_charge i_m_representation i_m_visibility s_m_atom_name i_m_template_index r_epik_H2O_pKa r_epik_H2O_pKa_uncertainty ::: 1 3 -7.572300 -1.794100 1.648000 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 2 32 -7.142200 -0.397600 1.496500 900 " " X " " 43 0.00000 0.00000 "UNK " " " " " 7 1 0 1 "" 0 <> <> 3 3 -7.239100 0.033900 0.096200 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 4 3 -6.924100 1.529600 -0.002400 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 5 3 -5.512700 1.783600 0.534300 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 6 41 -5.259356 2.852466 0.476484 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 7 3 -5.424700 1.281300 1.978100 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 8 41 -6.054246 1.873555 2.658472 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 9 3 -5.783000 -0.206000 2.018400 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 10 56 -4.122500 1.461100 2.456600 900 " " X " " 8 0.00000 0.00000 "UNK " " " " " 9 0 0 1 "" 0 <> <> 11 25 -4.538100 1.068300 -0.293200 900 " " X " " 43 0.00000 0.00000 "UNK " " " " " 7 0 0 1 "" 0 <> <> 12 3 -4.998000 0.142300 -1.331100 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 13 2 -3.218500 1.262200 -0.099600 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 14 15 -2.830800 1.875100 0.876300 900 " " X " " 70 0.00000 0.00000 "UNK " " " " " 8 0 0 1 "" 0 2.662 2.000 15 25 -2.328700 0.776800 -0.987800 900 " " X " " 43 0.00000 0.00000 "UNK " " " " " 7 0 0 1 "" 0 <> <> 16 3 -2.632900 0.360700 -2.369000 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 17 3 -1.287700 0.487200 -3.126700 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 18 3 -0.275900 0.027600 -2.043900 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 19 3 -0.893900 0.573500 -0.739500 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 20 3 -0.699800 -0.438400 0.391600 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 21 16 -1.389200 0.013800 1.558800 900 " " X " " 70 0.00000 0.00000 "UNK " " " " " 8 0 0 1 "" 0 -2.487 1.000 22 2 -0.246900 1.883800 -0.371200 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 23 2 0.814300 1.905900 0.514400 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 24 2 1.410400 3.107400 0.849100 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 25 2 0.939900 4.287600 0.304600 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 26 2 -0.124600 4.266100 -0.577000 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 27 2 -0.718200 3.064200 -0.914700 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 28 2 -1.252900 -0.429500 -4.322300 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 29 2 -1.416200 -1.791500 -4.153800 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 30 2 -1.384700 -2.633500 -5.252100 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 31 2 -1.189700 -2.111100 -6.519600 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 32 2 -1.026500 -0.749600 -6.688100 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 33 2 -1.063200 0.093300 -5.590000 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 34 56 -0.908700 1.425200 -5.755300 900 " " X " " 8 0.00000 0.00000 "UNK " " " " " 9 0 0 1 "" 0 <> <> 35 56 -1.543800 -3.964900 -5.087400 900 " " X " " 8 0.00000 0.00000 "UNK " " " " " 9 0 0 1 "" 0 <> <> 36 41 -8.591283 -1.909147 1.249957 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 37 41 -7.561786 -2.067449 2.713443 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 38 41 -6.885860 -2.451306 1.094032 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 39 41 -6.519112 -0.532571 -0.512675 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 40 41 -8.258110 -0.150643 -0.274693 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 41 41 -6.982006 1.847955 -1.053731 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 42 41 -7.653378 2.097983 0.593498 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 43 41 -5.734710 -0.566345 3.056581 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 44 41 -5.069868 -0.771383 1.400512 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 45 41 -4.128519 -0.295714 -1.843102 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 46 41 -5.616916 0.686348 -2.059766 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 47 41 -5.593862 -0.658983 -0.869696 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 48 41 -3.003364 -0.675037 -2.366725 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 49 41 -3.402089 1.024291 -2.790895 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 50 41 -1.090114 1.481613 -3.553435 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 51 41 -0.204277 -1.070040 -2.051346 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 52 41 0.712239 0.460962 -2.257860 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 53 41 -1.102144 -1.414636 0.083246 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 54 41 0.372752 -0.537771 0.614667 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 55 42 -1.363868 -0.586984 2.479895 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 14.160 0.800 56 41 1.179700 0.984100 0.942400 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 57 41 2.241800 3.124200 1.538100 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 58 41 1.403900 5.226600 0.568200 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 59 41 -0.492400 5.188300 -1.002100 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 60 41 -1.549900 3.047400 -1.603500 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 61 41 -1.568600 -2.198900 -3.165300 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 62 41 -1.164800 -2.768100 -7.376500 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 63 41 -0.874000 -0.342200 -7.676600 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 64 44 -7.820925 0.233169 2.089344 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 8.695 1.150 ::: } m_bond[134] { # First column is bond index # i_m_from i_m_to i_m_order i_m_from_rep i_m_to_rep ::: 1 1 2 1 1 1 2 1 36 1 1 1 3 1 37 1 1 1 4 1 38 1 1 1 5 2 1 1 1 1 6 2 9 1 1 1 7 2 3 1 1 1 8 2 64 1 1 1 9 3 2 1 1 1 10 3 4 1 1 1 11 3 39 1 1 1 12 3 40 1 1 1 13 4 3 1 1 1 14 4 5 1 1 1 15 4 41 1 1 1 16 4 42 1 1 1 17 5 4 1 1 1 18 5 6 1 1 1 19 5 7 1 1 1 20 5 11 1 1 1 21 6 5 1 1 1 22 7 5 1 1 1 23 7 8 1 1 1 24 7 9 1 1 1 25 7 10 1 1 1 26 8 7 1 1 1 27 9 2 1 1 1 28 9 7 1 1 1 29 9 43 1 1 1 30 9 44 1 1 1 31 10 7 1 1 1 32 11 5 1 1 1 33 11 12 1 1 1 34 11 13 1 1 1 35 12 11 1 1 1 36 12 45 1 1 1 37 12 46 1 1 1 38 12 47 1 1 1 39 13 11 1 1 1 40 13 14 2 1 1 41 13 15 1 1 1 42 14 13 2 1 1 43 15 13 1 1 1 44 15 19 1 1 1 45 15 16 1 1 1 46 16 15 1 1 1 47 16 17 1 1 1 48 16 48 1 1 1 49 16 49 1 1 1 50 17 16 1 1 1 51 17 18 1 1 1 52 17 28 1 1 1 53 17 50 1 1 1 54 18 17 1 1 1 55 18 19 1 1 1 56 18 51 1 1 1 57 18 52 1 1 1 58 19 15 1 1 1 59 19 18 1 1 1 60 19 20 1 1 1 61 19 22 1 1 1 62 20 19 1 1 1 63 20 21 1 1 1 64 20 53 1 1 1 65 20 54 1 1 1 66 21 20 1 1 1 67 21 55 1 1 1 68 22 19 1 1 1 69 22 27 2 1 1 70 22 23 1 1 1 71 23 22 1 1 1 72 23 24 2 1 1 73 23 56 1 1 1 74 24 23 2 1 1 75 24 25 1 1 1 76 24 57 1 1 1 77 25 24 1 1 1 78 25 26 2 1 1 79 25 58 1 1 1 80 26 25 2 1 1 81 26 27 1 1 1 82 26 59 1 1 1 83 27 22 2 1 1 84 27 26 1 1 1 85 27 60 1 1 1 86 28 17 1 1 1 87 28 33 2 1 1 88 28 29 1 1 1 89 29 28 1 1 1 90 29 30 2 1 1 91 29 61 1 1 1 92 30 29 2 1 1 93 30 31 1 1 1 94 30 35 1 1 1 95 31 30 1 1 1 96 31 32 2 1 1 97 31 62 1 1 1 98 32 31 2 1 1 99 32 33 1 1 1 100 32 63 1 1 1 101 33 28 2 1 1 102 33 32 1 1 1 103 33 34 1 1 1 104 34 33 1 1 1 105 35 30 1 1 1 106 36 1 1 1 1 107 37 1 1 1 1 108 38 1 1 1 1 109 39 3 1 1 1 110 40 3 1 1 1 111 41 4 1 1 1 112 42 4 1 1 1 113 43 9 1 1 1 114 44 9 1 1 1 115 45 12 1 1 1 116 46 12 1 1 1 117 47 12 1 1 1 118 48 16 1 1 1 119 49 16 1 1 1 120 50 17 1 1 1 121 51 18 1 1 1 122 52 18 1 1 1 123 53 20 1 1 1 124 54 20 1 1 1 125 55 21 1 1 1 126 56 23 1 1 1 127 57 24 1 1 1 128 58 25 1 1 1 129 59 26 1 1 1 130 60 27 1 1 1 131 61 29 1 1 1 132 62 31 1 1 1 133 63 32 1 1 1 134 64 2 1 1 1 ::: } } f_m_ct { s_m_title r_lp_tautomer_probability s_st_Chirality_1 s_st_Chirality_2 s_st_Chirality_3 s_st_Chirality_4 r_epik_Ionization_Penalty r_epik_Ionization_Penalty_Charging r_epik_Ionization_Penalty_Neutral r_epik_State_Penalty i_epik_Tot_Q ::: TEMP00000003 1 5_S_11_7_4_6 7_R_10_5_9_8 17_R_16_28_18_50 19_S_15_20_22_18 0.0133 0.0133 0.0000 0.0133 1 m_depend[10] { # First column is dependency index # i_m_depend_dependency s_m_depend_property ::: 1 10 r_lp_tautomer_probability 2 10 s_st_Chirality_1 3 10 s_st_Chirality_2 4 10 s_st_Chirality_3 5 10 s_st_Chirality_4 6 10 r_epik_Ionization_Penalty 7 10 r_epik_Ionization_Penalty_Charging 8 10 r_epik_Ionization_Penalty_Neutral 9 10 r_epik_State_Penalty 10 10 i_epik_Tot_Q ::: } m_atom[64] { # First column is atom index # i_m_mmod_type r_m_x_coord r_m_y_coord r_m_z_coord i_m_residue_number s_m_insertion_code s_m_mmod_res s_m_chain_name i_m_color r_m_charge1 r_m_charge2 s_m_pdb_residue_name s_m_pdb_atom_name s_m_grow_name i_m_atomic_number i_m_formal_charge i_m_representation i_m_visibility s_m_atom_name i_m_template_index r_epik_H2O_pKa r_epik_H2O_pKa_uncertainty ::: 1 3 5.159600 -5.009900 4.944100 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 2 32 4.734100 -3.666800 4.528400 900 " " X " " 43 0.00000 0.00000 "UNK " " " " " 7 1 0 1 "" 0 <> <> 3 3 5.332800 -3.300800 3.238400 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 4 3 4.986800 -1.847200 2.908000 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 5 3 3.464800 -1.690900 2.848100 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 6 41 3.043396 -2.280228 2.020385 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 7 3 2.862000 -2.124300 4.187300 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 8 41 1.769974 -1.993737 4.208117 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 9 3 3.269600 -3.569900 4.480600 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 10 56 3.336200 -1.289600 5.204900 900 " " X " " 8 0.00000 0.00000 "UNK " " " " " 9 0 0 1 "" 0 <> <> 11 25 3.126300 -0.289100 2.589600 900 " " X " " 43 0.00000 0.00000 "UNK " " " " " 7 0 0 1 "" 0 <> <> 12 3 3.551600 0.752200 3.528300 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 13 2 2.423800 0.042500 1.488300 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 14 15 2.100300 -0.817400 0.691800 900 " " X " " 70 0.00000 0.00000 "UNK " " " " " 8 0 0 1 "" 0 2.662 2.000 15 25 2.079900 1.327100 1.269800 900 " " X " " 43 0.00000 0.00000 "UNK " " " " " 7 0 0 1 "" 0 <> <> 16 3 2.428000 2.468900 2.135100 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 17 3 1.344300 3.535600 1.839300 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 18 3 1.127500 3.344900 0.314800 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 19 3 1.294400 1.821900 0.129800 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 20 3 -0.078400 1.146500 0.111400 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 21 16 0.089200 -0.271600 0.056900 900 " " X " " 70 0.00000 0.00000 "UNK " " " " " 8 0 0 1 "" 0 -2.487 1.000 22 2 2.021800 1.538900 -1.159300 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 23 2 3.403600 1.562800 -1.192800 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 24 2 4.071000 1.298000 -2.374100 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 25 2 3.356400 1.020100 -3.524300 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 26 2 1.974600 1.001800 -3.492100 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 27 2 1.307300 1.261000 -2.309600 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 28 2 1.852100 4.921400 2.143500 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 29 2 3.048500 5.353200 1.602800 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 30 2 3.514700 6.626400 1.881900 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 31 2 2.782400 7.467400 2.702800 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 32 2 1.586400 7.035800 3.243300 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 33 2 1.117400 5.764000 2.959900 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 34 56 -0.054500 5.343800 3.484400 900 " " X " " 8 0.00000 0.00000 "UNK " " " " " 9 0 0 1 "" 0 <> <> 35 56 4.684400 7.048300 1.353700 900 " " X " " 8 0.00000 0.00000 "UNK " " " " " 9 0 0 1 "" 0 <> <> 36 41 6.258363 -5.054373 4.971337 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 37 41 4.780193 -5.752970 4.227233 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 38 41 4.758857 -5.228065 5.945004 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 39 41 6.425524 -3.413046 3.296318 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 40 41 4.937812 -3.959348 2.450810 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 41 41 5.394568 -1.186944 3.687607 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 42 41 5.423346 -1.578467 1.934753 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 43 41 2.884368 -4.227175 3.687135 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 44 41 2.849824 -3.879428 5.449094 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 45 41 3.207565 1.733051 3.168341 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 46 41 4.649108 0.753078 3.602301 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 47 41 3.117437 0.552266 4.519021 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 48 41 2.409365 2.150248 3.187770 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 49 41 3.435167 2.829450 1.878941 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 50 41 0.434243 3.450599 2.451323 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 51 41 0.122068 3.696915 0.040587 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 52 41 1.882052 3.923644 -0.238108 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 53 41 -0.631659 1.415596 1.023262 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 54 41 -0.641043 1.483471 -0.771710 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 55 42 -0.792334 -0.929237 0.036616 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 14.160 0.800 56 41 3.961700 1.784300 -0.295100 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 57 41 5.150600 1.312000 -2.399100 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 58 41 3.877800 0.816900 -4.448100 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 59 41 1.416300 0.784700 -4.390800 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 60 41 0.227700 1.246700 -2.284400 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 61 41 3.619500 4.697400 0.962300 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 62 41 3.146200 8.460600 2.920800 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 63 41 1.015400 7.691600 3.883800 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 64 44 5.093219 -2.948888 5.280487 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 8.695 1.150 ::: } m_bond[134] { # First column is bond index # i_m_from i_m_to i_m_order i_m_from_rep i_m_to_rep ::: 1 1 2 1 1 1 2 1 36 1 1 1 3 1 37 1 1 1 4 1 38 1 1 1 5 2 1 1 1 1 6 2 9 1 1 1 7 2 3 1 1 1 8 2 64 1 1 1 9 3 2 1 1 1 10 3 4 1 1 1 11 3 39 1 1 1 12 3 40 1 1 1 13 4 3 1 1 1 14 4 5 1 1 1 15 4 41 1 1 1 16 4 42 1 1 1 17 5 4 1 1 1 18 5 6 1 1 1 19 5 7 1 1 1 20 5 11 1 1 1 21 6 5 1 1 1 22 7 5 1 1 1 23 7 8 1 1 1 24 7 9 1 1 1 25 7 10 1 1 1 26 8 7 1 1 1 27 9 2 1 1 1 28 9 7 1 1 1 29 9 43 1 1 1 30 9 44 1 1 1 31 10 7 1 1 1 32 11 5 1 1 1 33 11 12 1 1 1 34 11 13 1 1 1 35 12 11 1 1 1 36 12 45 1 1 1 37 12 46 1 1 1 38 12 47 1 1 1 39 13 11 1 1 1 40 13 14 2 1 1 41 13 15 1 1 1 42 14 13 2 1 1 43 15 13 1 1 1 44 15 19 1 1 1 45 15 16 1 1 1 46 16 15 1 1 1 47 16 17 1 1 1 48 16 48 1 1 1 49 16 49 1 1 1 50 17 16 1 1 1 51 17 18 1 1 1 52 17 28 1 1 1 53 17 50 1 1 1 54 18 17 1 1 1 55 18 19 1 1 1 56 18 51 1 1 1 57 18 52 1 1 1 58 19 15 1 1 1 59 19 18 1 1 1 60 19 20 1 1 1 61 19 22 1 1 1 62 20 19 1 1 1 63 20 21 1 1 1 64 20 53 1 1 1 65 20 54 1 1 1 66 21 20 1 1 1 67 21 55 1 1 1 68 22 19 1 1 1 69 22 27 2 1 1 70 22 23 1 1 1 71 23 22 1 1 1 72 23 24 2 1 1 73 23 56 1 1 1 74 24 23 2 1 1 75 24 25 1 1 1 76 24 57 1 1 1 77 25 24 1 1 1 78 25 26 2 1 1 79 25 58 1 1 1 80 26 25 2 1 1 81 26 27 1 1 1 82 26 59 1 1 1 83 27 22 2 1 1 84 27 26 1 1 1 85 27 60 1 1 1 86 28 17 1 1 1 87 28 33 2 1 1 88 28 29 1 1 1 89 29 28 1 1 1 90 29 30 2 1 1 91 29 61 1 1 1 92 30 29 2 1 1 93 30 31 1 1 1 94 30 35 1 1 1 95 31 30 1 1 1 96 31 32 2 1 1 97 31 62 1 1 1 98 32 31 2 1 1 99 32 33 1 1 1 100 32 63 1 1 1 101 33 28 2 1 1 102 33 32 1 1 1 103 33 34 1 1 1 104 34 33 1 1 1 105 35 30 1 1 1 106 36 1 1 1 1 107 37 1 1 1 1 108 38 1 1 1 1 109 39 3 1 1 1 110 40 3 1 1 1 111 41 4 1 1 1 112 42 4 1 1 1 113 43 9 1 1 1 114 44 9 1 1 1 115 45 12 1 1 1 116 46 12 1 1 1 117 47 12 1 1 1 118 48 16 1 1 1 119 49 16 1 1 1 120 50 17 1 1 1 121 51 18 1 1 1 122 52 18 1 1 1 123 53 20 1 1 1 124 54 20 1 1 1 125 55 21 1 1 1 126 56 23 1 1 1 127 57 24 1 1 1 128 58 25 1 1 1 129 59 26 1 1 1 130 60 27 1 1 1 131 61 29 1 1 1 132 62 31 1 1 1 133 63 32 1 1 1 134 64 2 1 1 1 ::: } } f_m_ct { s_m_title r_lp_tautomer_probability s_st_Chirality_1 s_st_Chirality_2 s_st_Chirality_3 s_st_Chirality_4 r_epik_Ionization_Penalty r_epik_Ionization_Penalty_Charging r_epik_Ionization_Penalty_Neutral r_epik_State_Penalty i_epik_Tot_Q ::: TEMP00000004 1 5_S_11_7_4_6 7_R_10_5_9_8 17_S_16_28_18_50 19_S_15_20_22_18 0.0133 0.0133 0.0000 0.0133 1 m_depend[10] { # First column is dependency index # i_m_depend_dependency s_m_depend_property ::: 1 10 r_lp_tautomer_probability 2 10 s_st_Chirality_1 3 10 s_st_Chirality_2 4 10 s_st_Chirality_3 5 10 s_st_Chirality_4 6 10 r_epik_Ionization_Penalty 7 10 r_epik_Ionization_Penalty_Charging 8 10 r_epik_Ionization_Penalty_Neutral 9 10 r_epik_State_Penalty 10 10 i_epik_Tot_Q ::: } m_atom[64] { # First column is atom index # i_m_mmod_type r_m_x_coord r_m_y_coord r_m_z_coord i_m_residue_number s_m_insertion_code s_m_mmod_res s_m_chain_name i_m_color r_m_charge1 r_m_charge2 s_m_pdb_residue_name s_m_pdb_atom_name s_m_grow_name i_m_atomic_number i_m_formal_charge i_m_representation i_m_visibility s_m_atom_name i_m_template_index r_epik_H2O_pKa r_epik_H2O_pKa_uncertainty ::: 1 3 -9.186600 1.727800 2.506300 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 2 32 -8.048900 1.373300 1.647300 900 " " X " " 43 0.00000 0.00000 "UNK " " " " " 7 1 0 1 "" 0 <> <> 3 3 -7.589900 2.535300 0.875700 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 4 3 -6.504600 2.098000 -0.110600 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 5 3 -5.336000 1.482200 0.663900 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 6 41 -4.852762 2.233580 1.305701 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 7 3 -5.850000 0.304400 1.496500 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 8 41 -5.038325 -0.197463 2.043599 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 9 3 -6.954300 0.793700 2.436200 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 10 56 -6.363200 -0.680400 0.645600 900 " " X " " 8 0.00000 0.00000 "UNK " " " " " 9 0 0 1 "" 0 <> <> 11 25 -4.319300 1.008800 -0.278600 900 " " X " " 43 0.00000 0.00000 "UNK " " " " " 7 0 0 1 "" 0 <> <> 12 3 -4.662500 -0.006600 -1.277400 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 13 2 -3.068200 1.507300 -0.226800 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 14 15 -2.730400 2.205800 0.709200 900 " " X " " 70 0.00000 0.00000 "UNK " " " " " 8 0 0 1 "" 0 2.662 2.000 15 25 -2.191500 1.231400 -1.212700 900 " " X " " 43 0.00000 0.00000 "UNK " " " " " 7 0 0 1 "" 0 <> <> 16 3 -2.536600 0.714600 -2.549500 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 17 3 -1.359200 1.147800 -3.458200 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 18 3 -0.149600 0.982600 -2.500600 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 19 3 -0.732700 1.395500 -1.132800 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 20 3 -0.167200 0.494900 -0.032700 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 21 16 -0.799000 0.807300 1.210300 900 " " X " " 70 0.00000 0.00000 "UNK " " " " " 8 0 0 1 "" 0 -2.487 1.000 22 2 -0.390700 2.834400 -0.843100 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 23 2 -1.181100 3.848400 -1.351000 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 24 2 -0.869700 5.168100 -1.082000 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 25 2 0.236800 5.474000 -0.312000 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 26 2 1.030200 4.460100 0.191500 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 27 2 0.716500 3.140300 -0.074200 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 28 2 -1.232800 0.234900 -4.650500 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 29 2 -1.164500 -1.133500 -4.469000 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 30 2 -1.048900 -1.972100 -5.564300 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 31 2 -1.001700 -1.439900 -6.841800 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 32 2 -1.070000 -0.072000 -7.023300 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 33 2 -1.190900 0.766600 -5.928000 900 " " X " " 2 0.00000 0.00000 "UNK " " " " " 6 0 0 1 "" 0 <> <> 34 56 -1.262800 2.103900 -6.105700 900 " " X " " 8 0.00000 0.00000 "UNK " " " " " 9 0 0 1 "" 0 <> <> 35 56 -0.981600 -3.309700 -5.386800 900 " " X " " 8 0.00000 0.00000 "UNK " " " " " 9 0 0 1 "" 0 <> <> 36 41 -9.990260 2.158661 1.891085 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 37 41 -8.863939 2.464712 3.256533 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 38 41 -9.557479 0.825466 3.014476 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 39 41 -8.437109 2.965020 0.321104 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 40 41 -7.178921 3.291340 1.560900 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 41 41 -6.919349 1.352990 -0.805541 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 42 41 -6.151034 2.971632 -0.677838 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 43 41 -6.546324 1.557918 3.114084 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 44 41 -7.335569 -0.053252 3.025527 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 45 41 -3.777016 -0.232706 -1.889604 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 46 41 -5.468037 0.372280 -1.923589 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 47 41 -5.000112 -0.921709 -0.768879 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 48 41 -2.635610 -0.380034 -2.505084 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 49 41 -3.488973 1.155831 -2.878592 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 50 41 -1.464147 2.147839 -3.904191 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 51 41 0.191028 -0.063199 -2.517214 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 52 41 0.669370 1.640188 -2.827504 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 53 41 -0.358258 -0.558191 -0.286660 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 54 41 0.916776 0.660004 0.055256 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 55 42 -0.519818 0.259173 2.122229 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 14.160 0.800 56 41 -2.043700 3.609500 -1.955400 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 57 41 -1.489300 5.960200 -1.475700 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 58 41 0.481700 6.505100 -0.104100 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 59 41 1.894900 4.699200 0.792900 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 60 41 1.336400 2.348200 0.319200 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 61 41 -1.201600 -1.548600 -3.472600 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 62 41 -0.911100 -2.094200 -7.696300 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 63 41 -1.032800 0.343100 -8.019600 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 <> <> 64 44 -8.388139 0.609094 0.932524 900 " " X " " 21 0.00000 0.00000 "UNK " " " " " 1 0 0 1 "" 0 8.695 1.150 ::: } m_bond[134] { # First column is bond index # i_m_from i_m_to i_m_order i_m_from_rep i_m_to_rep ::: 1 1 2 1 1 1 2 1 36 1 1 1 3 1 37 1 1 1 4 1 38 1 1 1 5 2 1 1 1 1 6 2 9 1 1 1 7 2 3 1 1 1 8 2 64 1 1 1 9 3 2 1 1 1 10 3 4 1 1 1 11 3 39 1 1 1 12 3 40 1 1 1 13 4 3 1 1 1 14 4 5 1 1 1 15 4 41 1 1 1 16 4 42 1 1 1 17 5 4 1 1 1 18 5 6 1 1 1 19 5 7 1 1 1 20 5 11 1 1 1 21 6 5 1 1 1 22 7 5 1 1 1 23 7 8 1 1 1 24 7 9 1 1 1 25 7 10 1 1 1 26 8 7 1 1 1 27 9 2 1 1 1 28 9 7 1 1 1 29 9 43 1 1 1 30 9 44 1 1 1 31 10 7 1 1 1 32 11 5 1 1 1 33 11 12 1 1 1 34 11 13 1 1 1 35 12 11 1 1 1 36 12 45 1 1 1 37 12 46 1 1 1 38 12 47 1 1 1 39 13 11 1 1 1 40 13 14 2 1 1 41 13 15 1 1 1 42 14 13 2 1 1 43 15 13 1 1 1 44 15 19 1 1 1 45 15 16 1 1 1 46 16 15 1 1 1 47 16 17 1 1 1 48 16 48 1 1 1 49 16 49 1 1 1 50 17 16 1 1 1 51 17 18 1 1 1 52 17 28 1 1 1 53 17 50 1 1 1 54 18 17 1 1 1 55 18 19 1 1 1 56 18 51 1 1 1 57 18 52 1 1 1 58 19 15 1 1 1 59 19 18 1 1 1 60 19 20 1 1 1 61 19 22 1 1 1 62 20 19 1 1 1 63 20 21 1 1 1 64 20 53 1 1 1 65 20 54 1 1 1 66 21 20 1 1 1 67 21 55 1 1 1 68 22 19 1 1 1 69 22 27 2 1 1 70 22 23 1 1 1 71 23 22 1 1 1 72 23 24 2 1 1 73 23 56 1 1 1 74 24 23 2 1 1 75 24 25 1 1 1 76 24 57 1 1 1 77 25 24 1 1 1 78 25 26 2 1 1 79 25 58 1 1 1 80 26 25 2 1 1 81 26 27 1 1 1 82 26 59 1 1 1 83 27 22 2 1 1 84 27 26 1 1 1 85 27 60 1 1 1 86 28 17 1 1 1 87 28 33 2 1 1 88 28 29 1 1 1 89 29 28 1 1 1 90 29 30 2 1 1 91 29 61 1 1 1 92 30 29 2 1 1 93 30 31 1 1 1 94 30 35 1 1 1 95 31 30 1 1 1 96 31 32 2 1 1 97 31 62 1 1 1 98 32 31 2 1 1 99 32 33 1 1 1 100 32 63 1 1 1 101 33 28 2 1 1 102 33 32 1 1 1 103 33 34 1 1 1 104 34 33 1 1 1 105 35 30 1 1 1 106 36 1 1 1 1 107 37 1 1 1 1 108 38 1 1 1 1 109 39 3 1 1 1 110 40 3 1 1 1 111 41 4 1 1 1 112 42 4 1 1 1 113 43 9 1 1 1 114 44 9 1 1 1 115 45 12 1 1 1 116 46 12 1 1 1 117 47 12 1 1 1 118 48 16 1 1 1 119 49 16 1 1 1 120 50 17 1 1 1 121 51 18 1 1 1 122 52 18 1 1 1 123 53 20 1 1 1 124 54 20 1 1 1 125 55 21 1 1 1 126 56 23 1 1 1 127 57 24 1 1 1 128 58 25 1 1 1 129 59 26 1 1 1 130 60 27 1 1 1 131 61 29 1 1 1 132 62 31 1 1 1 133 63 32 1 1 1 134 64 2 1 1 1 ::: } }