There are 22 ligand heavy atoms Ligand center of coords (x y z): 34.1654545454546 -3.62772727272727 -28.3083181818182 useligsph flag does not exist. Starting number of spheres from sph/sph cluster 0: 968 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 615 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 609 Number of spheres polar: 206, nonpolar: 293, out of current total: 609 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 22.17388 46.10336 -15.46700 8.17753 -40.00459 -16.58238 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 238 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 193 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 34.1654545454546 -3.62772727272727 -28.3083181818182 Center point: 31 xyz: 34.25563 -3.15769 -27.83150 After continuity checking, number of spheres is: 167 Spheres center of coords (x y z): 31.9659694610778 -2.01238700598802 -27.3404210778443 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 39.5820702290077 -8.51185152671755 -23.8423320610687 Average weighted-distance for final elimination is: 29.4140709907609 Final number of output spheres is: 120 Number of polar spheres: 54 Number of nonpolar spheres: 45 Number of spheres that are near neither polar nor nonpolar receptor atoms: 21 Final number of spheres that are from crystallographic ligand: 0