usefragsph not on
There are 17 ligand heavy atoms
Ligand center of coords (x y z): -9.75835294117647 4.90758823529412 35.8812941176471
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1646
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 918
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 918
Number of spheres polar: 346, nonpolar: 356, out of current total: 918
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -19.75018 0.07311 -4.64747 14.72183 25.88294 45.81504
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 515
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 438
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 307
Spheres center of coords (x y z): -14.4447068403909 5.11369788273616 31.1247978175896
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 7.2209721149426
Final number of output spheres is: 60
Number of polar spheres: 20
Number of nonpolar spheres: 38
Number of spheres that are near neither polar nor nonpolar receptor atoms: 2
Final number of spheres that are from crystallographic ligand: 17