Creating binding-site residue list Creating molecular surface real 0m2.769s user 0m0.301s sys 0m0.123s Creating sphgen spheres Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 0:1646 spheres. 68. 68. 74. 74. 74. 75. 76. 76. 76. 76. 76. 76. 76. 76. 76. 76. 76. 76. 76. 76. 76. 76. 76. 77. 77. 77. 77. 77. 78. 78. 78. 78. 78. 79. 79. 80. 80. 80. 80. 80. 80. 80. 80. 81. 81. 81. 81. 83. 83. 84. 84. 84. 84. 84. 84. 85. 85. 88. 93. 94. 94. 94. 94. 94. 94. 94. 94. 94. 94. 94. 94. 94. 94. 94. 94. 94. 94. 94. 94. 94. 94. 95. 95. 95. 97. 101. 101. 101. 101. 104. 104. 104. 104. 104. 104. 105. 105. 105. 105. 105. 110. 110. 110. 110. 110. 110. 110. 110. 110. 110. 110. 110. 110. 110. 110. 110. 111. 111. 111. 111. 111. 111. 111. 111. 111. 111. 111. 111. 111. 111. 111. 112. 112. 112. 112. 112. 112. 112. 112. 112. 112. 112. 112. 112. 112. 112. 112. 112. 112. 282. 282. 283. 283. 283. 283. 283. 283. 283. 284. 284. 284. 284. 284. 284. 284. 284. 284. 284. 284. 284. 284. 284. 284. 284. 284. 284. 284. 284. 284. 284. 284. 284. 284. 284. 284. 284. 284. 284. 284. 284. 284. 284. 285. 285. 285. 285. 285. 285. 285. 285. 285. 285. 285. 285. 285. 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889.1086.1087.1087.1087.1087.1088.1089.1089.1089.1089.1089.1089.1089.1089.1089.1089.1098.1098.1098.1098.1098.1098.1098.1098.1098.1098.1098.1099.1099.1099.1099.1100.1104.1104.1104.1104.1112.1112.1112.1112.1112.1112.1112.1112.1112.1113.1113.1113.1113.1113.1113.1113.1113.1113.1113.1113.1113.1114.1120.1120.1120.1128.1128.1128.1128.1128.1128.1128.1128.1129.1129.1129.1129.1129.1129.1129.1129.1132.1132.1132.1132.1132.1132.1132.1132.1132.1132.1132.1132.1133.1133.1133.1133.1133.1133.1133.1173.1173.1176.1176.1176.1176.1176.1176.1176.1176.1176.1176.1207.1207.1207.1207.1207.1210.1210.1210.1210.1210.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1212.1212.1212.1213.1213.1213.1213.1213.1213.1213.1213.1213.1215.1218.1218.1218.1218.1218.1218.1218.1218.1218.1218.1218.1218.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1220.1220.1220.1221.1221.1221.1221.1221.1221.1221.1221.1221.1221.1221.1221.1221.1221.1221.1221.1221.1221.1221.1225.1225.1225.1225.1225.1225.1225.1226.1227.1227.1227.1227.1227.1227.1227.1227.1228.1228.1228.1228.1228.1228.1228.1228.1229.1229.1229.1229.1229.1229.1231.1233.1233.1233.1233.1233.1233.1233.1233.1233.1233.1233.1233.1233.1233.1233.1233.1233.1233.1234.1234.1234.1234.1234.1234.1234.1236.1236.1236.1236.1236.1236.1236.1236.1236.1236.1236.1236.1236.1236.1236.1236.1236.1238.1238.1238.1238.1238.1240.1240.1240.1240.1241.1241.1241.1242.1242.1242.1242.1242.1242.1242.1242.1242.1242.1242.1242.1243.1243.1243.1243.1243.1243.1243.1243.1243.1243.1243.1243.1243.1243.1243.1244.1244.1244.1244.1244.1244.1244.1244.1245.1245.1245.1245.1245.1245.1245.1245.1245.1245.1245.1245.1245.1245.1245.1245.1245.1245.1245.1245.1246.1246.1249.1250.1250.1251.1251.1251.1251.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1253.1253.1253.1253.1253.1255.1255.1255.1255.1255.1256.1256.1256.1257.1257.1257.1257.1262.1262.1262.1262.1262.1262.1262.1262.1262.1262.1262.1262.1262.1262.1262.1262.1262.1262.1262.1262.1262.1262.1262.1262.1263.1263.1263.1263.1263.1263.1263.1263.1263.1263.1263.1263.1263.1263.1263.1263.1263.1263.1263.1263.1263.1263.1263.1263.1263.1263.1263.1263.1263.1263.1263.1263.1267.1267.1267.1267.1267.1267.1267.1267.1267.1267.1268.1269.1269.1269.1271.1271.1271.1271.1271.1271.1271.1271.1271.1272.1272.1272.1272.1272.1272.1275.1275.1276.1276.1276.1276.1277.1277.1277.1277.1277.1278.1278.1278.1278.1278.1278.1278.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1280.1280.1280.1280.1281.1281.1281.1281.1281.1281.1281.1281.1284.1284.1284.1290.1291.1292.1292.1292.1292.1296.1296.1301.1301.1301.1301.1301.1301.1301.1301.1301.1302.1302.1303.1303.1303.1303.1303.1304.1304.1304.1304.1304.1306.1309.1309.1309.1309.1309.1309.1309.1309.1309.1309.1309.1309.1309.1309.1309.1309.1309.1310.1310.1310.1310.1310.1311.1315.1315.1315.1315.1363.1363.1363.1363.1363.1364.1367.1367.1367.1367.1367.1367.FORTRAN STOP Generating faster matching2 spheres for docking Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 1: 45 spheres. 9001.9002.9003.9004.9005.9006.9007.9008.9009.9010.9011.9012.9013.9014.9015.9016.9017.9018.9019.9020.9021.9022.9023.9024.9025.9026.9027.9028.9029.9030.9031.9032.9033.9034.9035.9036.9037.9038.9039.9040.9041.9042.9043.9044.9045.FORTRAN STOP Coloring matching spheres Creating box around spheres Hydrogen solvent excluded grid being made FORTRAN STOP real 22m14.700s user 22m5.421s sys 0m0.091s Heavy solvent excluded grid being made FORTRAN STOP real 32m7.894s user 31m55.219s sys 0m0.090s