There are 33 ligand heavy atoms Ligand center of coords (x y z): 38.561303030303 55.7894848484849 34.624303030303 useligsph flag does not exist. Starting number of spheres from sph/sph cluster 0: 1407 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 929 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 919 Number of spheres polar: 324, nonpolar: 397, out of current total: 919 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 26.59357 50.52986 43.81866 67.78871 22.63151 46.61634 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 373 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 281 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 38.561303030303 55.7894848484849 34.624303030303 Center point: 252 xyz: 38.47413 55.81972 34.24900 After continuity checking, number of spheres is: 220 Spheres center of coords (x y z): 41.8105187727273 54.4023717727272 33.9658758181818 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 34.2812472398795 50.7503435931749 32.0778919371027 Average weighted-distance for final elimination is: 28.1837737192336 Final number of output spheres is: 120 Number of polar spheres: 51 Number of nonpolar spheres: 38 Number of spheres that are near neither polar nor nonpolar receptor atoms: 31 Final number of spheres that are from crystallographic ligand: 0