usefragsph not on
There are 33 ligand heavy atoms
Ligand center of coords (x y z): 38.561303030303 55.7894848484849 34.624303030303
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1407
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 632
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 632
Number of spheres polar: 204, nonpolar: 270, out of current total: 632
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 29.04665 48.45928 48.58884 65.76453 24.66755 44.61576
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 368
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 318
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 295
Spheres center of coords (x y z): 40.6828310508474 54.8975566440678 34.0236871186441
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.65423431283874
Final number of output spheres is: 60
Number of polar spheres: 21
Number of nonpolar spheres: 34
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 33